ION CHANNEL DRUG SCREENING

Comprehensive Voltage-Gated Ion Channel Profiling for Drug Discovery

Systematic, high-throughput screening across a broad panel of voltage-gated ion channels and human, mouse and rat cell-line resources—designed to reveal pharmacological effects beyond conventional targeted panels.

Broad VGIC
coverage
Standardized
and reproducible
Fast turnaround
(~1 week)*

*Turnaround depends on panel configuration, assay design, controls, replication and analysis requirements.

IonScreen workflow showing approximately 300 stable cell lines, three compounds at three concentrations, broad VGIC screening, standardized analysis and approximately one-week turnaround

FROM BIOLOGY TO EVIDENCE

One connected workflow

Cell resources→Electrophysiology→Screening→Analysis→Models→Knowledge

*Turnaround and coverage depend on the agreed channel panel, assay design, controls and replication.

SERVICES

What IonScreen can enable

The service portfolio is organized around six interconnected capabilities rather than isolated assays.

01 · SCREEN

Compound & Channelome Profiling

Broad VGIC screening, custom channel panels, selectivity profiling and off-target profiling using standardized automated electrophysiology workflows.

  • Up to three compounds × three concentrations across a broad VGIC panel, with turnaround as fast as ~1 week*
  • Family-specific or customer-defined panels
  • Standardized compound–channel effect maps
02 · CHARACTERIZE

Biophysics, Pharmacology & Variants

Detailed characterization of wild-type and variant channels under controlled experimental conditions.

  • Activation, inactivation, recovery and kinetics
  • Concentration-response and pharmacology
  • Temperature-dependent characterization
  • WT versus point-mutation comparison
03 · CELLS

Cell-Line Engineering & Resources

A broad collection of stable ion-channel cell resources plus development of customer-defined variants.

  • ~300 human, mouse and rat ion-channel cell lines
  • Cell-line access
  • Ready-to-record cells
  • Custom and point-mutation cell-line generation
04 · MODEL

Electrophysiology-to-Model

Transform standardized raw electrophysiology into experimentally constrained computational ion-channel models.

  • Feature extraction and kinetic parameterization
  • Model optimization and experimental validation
  • WT and variant-specific models
  • Quantification of mutation-induced functional changes
05 · DATA

Traceable Data & Analysis

Machine-readable electrophysiology with automated analysis and provenance from summary result to source recording.

  • Standardized HDF5-based organization
  • Automated QC and feature extraction
  • Traceability to individual cells and traces
  • Secure web access to customer results
06 · KNOWLEDGE

Channelpedia & Reference Evidence

Connect new experiments with structured ion-channel knowledge, reference kinetics and published pharmacology.

  • Reference electrophysiology datasets
  • Channelpedia knowledge resources
  • AI-assisted literature screening
  • Drug–ion channel literature effect maps with source provenance

SCREENING WORKFLOW

From compound to explorable evidence

1

Define

Compounds, concentrations, channel coverage, controls and assay conditions.

2

Record

Standardized automated patch-clamp measurements across the agreed panel.

3

Structure

Raw recordings and metadata organized into standardized HDF5-based datasets.

4

Analyze

Automated QC, feature extraction and detailed channel-specific analysis.

5

Explore

Secure web access from compound/channel summaries down to individual recordings.

APC experience: Flyion · Nanion Patchliner · Nanion SyncroPatch · Sophion QPatch Compact · Sophion Qube

CELL RESOURCES

From existing channels to customer-defined variants

IonScreen builds on a collection of approximately 300 stable cell lines overexpressing human, mouse and rat ion-channel genes. The resource can support screening, reference characterization, licensing discussions and development of new variants.

Existing library

Broad VGIC and related ion-channel resources developed for standardized electrophysiology.

Point mutations

Generate customer-defined variants and compare their electrophysiological phenotype with the corresponding wild type.

Variant pharmacology

Assess whether mutations alter compound sensitivity or other pharmacological responses.

Ready-to-record

Prepared cell workflows designed to reduce cell-culture constraints in electrophysiology campaigns.

IonScreen cell-line catalogue organized by rat, mouse and human ion-channel cell lines and host cells
Current IonScreen cell-line resource spanning rat, mouse and human ion channels. Click the catalogue to inspect the full-resolution image.

LITERATURE + EXPERIMENT

Build a drug–channel evidence map

Published evidence

AI-assisted screening identifies relevant reports of drug effects across ion channels and extracts structured experimental context with links back to supporting literature.

+

IonScreen evidence

Standardized experimental screening measures compound effects across the agreed channel panel with traceability to the underlying electrophysiology.

Known & experimentally supportedReported but context-dependentPotentially novel observationLimited literature evidence identified

AI-assisted literature outputs should retain publication provenance and be reviewed as evidence extraction, not treated as proof that an interaction does or does not exist.

WHY IONSCREEN

From fragmented ion-channel data to an integrated evidence platform

IonScreen builds on more than a decade of ion-channel research and technology development conducted at EPFL as part of the Blue Brain Project. This work established the cell resources, standardized electrophysiology workflows, datasets, analysis tools and knowledge infrastructure that form the scientific foundation for IonScreen. The timeline below traces this research journey and its transition toward an integrated ion-channel platform.

Research foundation: EPFL · Blue Brain Project

2011–2014 · BUILD THE FOUNDATION
2011

Channelpedia: organizing ion-channel knowledge

Channelpedia was developed to organize ion-channel knowledge, experimental data, metadata and computational models in a structured and accessible resource. Bringing these sources together also highlighted a fundamental problem: comprehensive, standardized electrophysiological data were still missing for many ion channels.

Channelpedia in 2011 — early ion-channel knowledgebase and data platform. Play the short historical demonstration.
2014

Automated electrophysiology & standardized data

Automated patch-clamp electrophysiology was combined with standardized experimental protocols, structured data formats and reproducible analysis workflows, establishing a foundation for systematic comparison of many ion channels under controlled conditions.

Automated electrophysiology workflow under controlled laboratory conditions, including temperature-controlled recordings.
2016–2023 · MAP THE CHANNELS
2016

Systematic Kv channel characterization

A systematic workflow was established to characterize Kv-channel biophysics using standardized electrophysiological protocols at 15°C, 25°C and 35°C, enabling direct comparison of channel kinetics under controlled experimental conditions.

Representative electrophysiological recordings from systematic Kv channel characterization
Representative Kv-family recordings at 25°C. Kinetic characterization was performed at 15°C, 25°C and 35°C.
2018

Kir & K2P channel characterization

The systematic characterization workflow was extended to inward-rectifier (Kir) and two-pore-domain (K2P) potassium channels, broadening the experimental resource across functionally distinct potassium-channel families.

Representative electrophysiological recordings from systematic Kir and K2P channel characterization
Representative rat Kir- and K2P-family recordings at 25°C. Kinetic characterization was performed at 25°C and 35°C.
2020

HCN channel characterization

HCN channels were systematically characterized using standardized electrophysiology, enabling direct comparison of kinetic properties across mammalian isoforms, species and experimental temperatures.

Representative electrophysiological recordings from systematic mouse HCN channel characterization
Representative mouse HCN-family recordings at 15°C, 25°C and 35°C. Kinetic characterization was performed across rat, mouse and human HCN channels.
2022

Nav channel characterization

The standardized workflow was extended to the Nav family, generating comparable electrophysiological measurements and kinetic parameters across voltage-gated sodium channels.

Representative electrophysiological recordings from systematic mouse Nav channel characterization
Representative mouse Nav-family recordings at 25°C. Kinetic characterization was performed at 15°C, 25°C and 37°C.
2023

Cav channel characterization

Systematic characterization was expanded to the Cav family, further extending standardized electrophysiological coverage across the major voltage-gated ion-channel families.

Representative electrophysiological recordings from systematic mouse Cav channel characterization
Representative mouse Cav-family recordings at 25°C. Kinetic characterization was performed at 15°C, 25°C and 37°C.
2024–2025 · SCREEN & SYNTHESIZE

Two complementary evidence streams emerged: systematic experimental screening and structured extraction of published drug–channel evidence.

2024–2025

AI-assisted literature screening (ChannelAID)

An AI-assisted workflow (ChannelAID) was developed to screen published literature for reported effects of a given compound across ion channels and organize retrieved evidence into structured drug–channel effect maps with links back to supporting publications and experimental context.

AI-assisted literature screening
AI-assisted evidence mapping of reported TTA-A2 effects across ion channels, with traceability to individual publications and experimental context.
2024

From channel characterization to Channelome screening

With broad cell-line resources, automated electrophysiology and standardized analysis in place, a proof-of-concept program profiled 15 compounds across the major voltage-gated ion-channel families, demonstrating the feasibility of broad, systematic Channelome pharmacology.

Channelome screening
Representative control (grey) and 10 µM TTA-A2 (dark red) recordings across major VGIC families, illustrating systematic experimental profiling beyond the compound's established T-type calcium-channel activity.
2026 · INTEGRATE THE EVIDENCE
2026 →

IonScreen: translating the research platform

The next step is to bring cell resources, automated electrophysiology, comprehensive screening, standardized data, automated analysis, computational modeling and structured knowledge together as one integrated platform—connecting published evidence with what can be measured systematically in the laboratory. Hence, IonScreen is being developed as an emerging EPFL spin-off initiative to translate this research foundation into an integrated ion-channel platform for drug discovery and ion channel research.

IonScreen
IonScreen Overview

SCIENTIFIC FOUNDATION

Built on systematic ion-channel research

ABOUT

An emerging venture in Lausanne

IonScreen is an emerging EPFL spin-off initiative building on ion-channel research and technology developed at EPFL through the Blue Brain Project, with the aim of translating this scientific foundation into an integrated platform for drug discovery and ion channel research.

Rajnish Ranjan, PhD
Founder, IonScreen
Ion-channel electrophysiology · Channelome profiling · Biophysics

Partner with IonScreen

We are engaging with pharmaceutical, biotechnology, instrumentation and research partners interested in ion-channel profiling, cell resources, assay development and platform collaboration.

rajnish@ionscreen.ch

Lausanne, Switzerland